Version 2.0
D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-opsin3

Gene: Ci-opsin3
Ghost cluster: 1143
Reference:
  • Kusakabe T., Yoshida, R., Ikeda, Y., Tsuda, M. (2004). "Computational discovery of DNA motifs associated with cell type-specific gene expression in Ciona." Dev Biol 276:563-580. (PUBMED)
This construct is available from Prof. Kusakabe.
Detected expression Expression was detected in brain vesicle.

Construct description 5'-end primer with a SalI restriction site.
3'-end primer with a BamHI restriction site.
Vector: pBluescript-EGFP
Insert size: 2538 bps
Insert sequence:
CTGCTGGCTT CTTCACCAAG GGACCTCATA AGCACATCAC ACTCAGGTTC CAACCAAAGG TTAGTATTTA TTCAACTCAG GGTCTGTTTA ATCTTGGTAT GAAATAAAAA CTATTTATCC TTGTGTGTCA GGAAAGTTAC CCATTACCCC TAACACTACA TATGTTGAAG TTAATAAACT TTCATTTTAA CTTTTTTAGT TGAAAAACAT CGAACCTGAA ACACCTCAAG TGTCTCTACT AACCCTTCCA GTTACTTTGG TGATTGGACT TCTTGCTTAC AACTATTTAC AGGTTTGTTT ATTAAATGTT GTTTGATTTG ATTGTGCCCA TAATTGACTT CATTACCTAA AAATTTCAAG GCTGTATGAA TTGTGTTAGT AAGGTTACTT AATAAAGCAA TTTAGTGAAT TCAATGCGAC AAAGAGTATT TTATGACACA CCAGCAACTT TTCCTTCCCA GGTTTTCGAA TTTCTTCAAA AACTTTTCTC CATGATCGTC AGCAAGCTAG ATAATCCTGA GGTTTCGACA AGGTCCACCA GGAAGTCACG TAAATGATGA CGTCACGGGG GAATTCCCGG CGATATTTTA TGCAGATTGA GTTGGCAAGA GGTCGTGAGA ATACTTGGGT CAAATTCTAT TTATGTTCAC AACGATTGAG GCAACCTATG CGATTTCTAT GAACTATCTT TATGTTTGTT TAATTCTGTG TTGTTTGTAC CAATGTGAGA ATAAACCGAA TCAAAGTTAT TCAATTTTTA TCTTTAGGAT AATGAAGTGA ATTTATTGTG GCTTTACAAT CGCGGGACAG TCGTTATAAC ACGGATGTTC TGCTTCATAA ACCTCGTGTT CACTTGTTAC CACGTATGTA ACGTTGTGGG TGATTGCTTT TTTTGTAAAC GTAAAATCCT ATAATTACAT ACATGGCAAT TACAGCAAAA TTTTTAATAC CATATATTGG ACCATCTTAC CCCAACCTAA TTTACGTAAG ATCTCCACAT ACATTCATTA TGTGTGGAAA TCCATCAACA TTTTGTTCGT CATAAAACCG TAATTGCAGC GCTGGAACCA ATTTTCGTCC TAAATTGTTT CGTGTGTTTT ATTAGCCATC TTTTAAACGT CCTGAGGGTA AAAACAGACA GTGTTTTGGT TTTGGTTTCT AGTTTTGTTG AGGTTTGTTA AACATCTTAA GAAATCATCA ACAAAGTTAC ATACGTGGTA ACTCGTAAGT AGGCACCATG CATATAGTAG GGTGGGGGAA GATGGGACAC TTTTAGCCCT GAATACCCAA ATATCCTGAT CGTGTTTTAA ACAATTAACA ACGGTCCATG GGAGTCGTGA GGATACGGTT TTATAATTCA TTGACTATTC TTCGTTTACT GCCATATAGG ACGAGAAAAT AGAATAAAAA GGTGTCCCAT CTTCCTCCAC CCTACTATAT GAAACAGAAC ACCTGTGTTA TAACGACTGT TGATGCCCCG TTGTAGCATT TGACTTGGTT ATGTGTATTT TTTATTATCA AAGTTGGCCA TATGTGCAAA GTTTGAAACT TACCACACAA CTAATCCTAT AAGTCCCATG GGAGTTTTCC CACCACCGTG GAAAAATATA AACTTCCGGC TAAATGACGT CAGCAGATCT ATCGTCAAAG AAATTGACTA AAAATATTTT CACGATTTAC GTCATTGTAA TAAAGTTTTT ACACGAGCAG CATATAAACC TTGCACTCTT GAACCTCATG GAGTTAGTTT GTATTGGCAA TATCCAATTC GGTAGTAAAC AAAGAACTAT CAAAGAATTA TAGAACCGTA TTTCCTCACG ACTTCCATAG ACTGTTCCTA ATTGTTTAAG ACACGACCCG GATGATATTA AGATATTGTA AATATAAAAC TTGTTTTGTC GGCGCCGTAG CACAGTTGGT TGGAACCCCT GCCTCTAACC TAGAGGTAAT GAGTTCAAGG CTTGCCGCTG CTACCATTGT GAGAGTATGT CCTTGGGCAA GACAGTTATC GATAATTGCC CCAACCCAGT GGCTATCAGC AAATAAAAGG AGAAAAAATC CACAAAGTAA CATGCTTTGT AACTCGTAAG CTGGCGCGAG GTGTATGGAC GTTCATGTTA CAACGACTGT CGTTTTCCGC CCACGCGAGG ATACAGTAAG TTACATTCAT TCATACATTT ACATCGGAAT TTTCTATCTT TTCAAACACG ACGTTTCGAC TCTCAATTAT ATCACCTTCA TCAGGTCGTC TTATATTCAA TGCAAAACAA CGATGTGTTT TTCAAGTGCT TTGAATTTTA ATTAAAAATC CAAGCATGGA ATATTTTATA TCCGATTATT CTGGTGGCTT ACACGCGATT AATCTGCCCT AATCCAACTC TGTGTCTTTG TCATTCCGTA ATTCACGCTG CGTTTTCCCA GATTAATTTT CCTTTTGACC TGGTTTAACC GCGTGTGGCC GCGACTCCAT TTAAGAATCG ACGCGTCTCG GTTCCAAGTC ACATTCCACT TCGCTGTTCG TGGAGAAGAC ACATTTTC