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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-Sna

Organism: C. intestinalis
Dataset: JGI 1
Description: -3000:+200 region of ci0100151261
Promoter location: scaffold_2:184228-187427:-
Gene alias: ci0100151261

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
E1 E-box unknown 184699 + 29 CAAATG
E2 E-box unknown 184729 + 29 CATTTG
E3 E-box unknown 184823 + 29 CATATG
E4 E-box unknown 184845 + 29 CACCTG
T2 T-box Ci-VegTR 184901 - 16 AGGTGCCAAA
Macho1 macho1 Ci-macho1 184930 + 15 GCCGCCCGCTG
E6 E-box unknown 184988 + 29 CAACTG
Macho1 macho1 Ci-macho1 185007 + 15 GCCGCCCGTCG
T3 T-box Ci-VegTR 185037 - 16 AGGTGGGATC
E7 E-box unknown 185091 + 29 CAACTG
Macho1 macho1 Ci-macho1 186567 - 15 GACACCCGCGG
Macho1 macho1 Ci-macho1 187014 - 15 GCCGCCTGTTG
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  • reported binding sites
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Sequence
CGTATATTTC AATCACTTAA CGGCTTAATT CGAAACCGAG CAAGTGTTAT GGTTAGATAC GTCATGTTTC TAATGCAAGG GTATTTTAAT CTATATCTCT ATATACTATT AATAGACAAT CATTATTCCT ATGTAGTTAG AATTTCATCA CATTCAGTAT TTTATTTGTA TATAAGCCAT CTTTGATTTT AAAATAATTT TATTGCCGCC TTAGCCGAGA GCAAACTAAT AACTGGACTT TAAACGATAC GTCACTCGTT ACGGATTTTT TCCAGACTAT ATTAAAGTGA CGTCAGTGAA ATGAATGCAT GCGCGTGTCG CACTTTGTTA TTTAATGACG TAATCTTGAT GCGGCCACAT AGATTAATGG GTGCACCGAG TACTTTCATC ATACCAGGCG TCCGGTGCCG AAGCAACAGG CGGCTAACCG AAATAGAACA ACGACCAGCA GGAGCGAGCC AACAACTGTT ACCGAAGCGG TCCACTTAAT CCCGGGACAC GCGCGAACTG TACGCGACAA ATATCAAAAT ATAAACAACG GCATTCAACT ATTAATATTG CGCCTTTGGT TACGTTCAAC CGAGTTTTAA AAACCTGTCA CATTTTTAAA CTGAAGGCTG TCTGTATAGT CATCGAAAGA ATATCCCACG ACCCAGCGTG CACACTTGGC CCGTATAACC TTCCGTTTGT GTTGGTTTTT ATTCCGAATA CTCCAAATGA TTGTAGCGCC GGGATACCTT AGTTGGCTTA GTACACCGAT AGCAGACCGC CCCTCCACGA AATACAGACA CTCTGTTTGT CACCAGTGTT CTATCAACTG TCTCGTTTAG CTACGGTGTA CACATGCTTC TACATACGTT CCGCGGGTGT CTATTGTTGC CCTTGTCCTT ACAGTGCGTC TAGAGTAAAC TAACCAAGAT ACGATTGCGT ATACCGGGAC AATAGGATAA CATTTGCACG GAGACACGTG GTCAACTATA CGAGGCACGT AACCGCAGGG CACTACCAAA GTCCGGTTAT TTAAGTTTAT ATTTTTGCCT AGCCGTCGAA AAAACATGCA TATATTAAAA TTAATAAAAC CGTTTATTCT CTATATCGTA CATTGGTTAT GAGCGCTTTA GCACCAAAAT ATAACGAGTT CTATAAACGC AGTTAAATTC AATTGATTTT ACCTTACCAG CAGGCAGTTT CTCTCCACAA ACATTTAAGC CTCATTCCTA ACGTGCGGGA ATTCTCCTCA TCCGATAGAA ACATATTAGT GTACGGACAC TTCTCCATTC TTTGACAATG TGGTGACAGG GGAATATCAT TTACGACAGT GCGAAGCGTC TCCTTTACCG AATAAACCTC ATGATTCTAA CATTAAAGTC GTTGCAATAG GTACGGATAT TCTAAAATTG AAACTATGCA CAATCACGGG TATACCATAT ATATATATAG TAGGGTGGGA AAAATAGGAC ACCATTTTAT TCTATTTTCT CGTCCCATTT TGTAGAAAAC AAGGAACATT TAAAGAATTA TAAAACCGTA TCCGTACGAC TACCATAGAC CGTTGTAAAT TGTTTAAACA CGATCAAGAT ATTTGGATAT TATGTGCTAA CGGTGTCTCA TCTACCCCCA CCCTATTATA ACACCGAACG TTAAAAATTC ATTGCACCGA ATGTTCCACC GTTTTAGTGT ATTAGCGGAT TCAGAATGTC GCACGCGTTC AAAGCGACCC AGTACCTATT GGTGTCAATT AACACCATTT TGGATCGAAT TTTCGGATGA GCCTTTGTGT GAAAATTAGC GGTTCACTCT GCCGGCCATC CTCAGGTTGA GATAACGCAT CTATCGCAAA GTAGCAGCTG AAGTGAAGAC TTGCGATCGG AGAGAATTTA ATTTCGATAT TTTTATTTGC ATTGATTTAC AAAAATATTT ATACAGTTTT TGATTTTGAA AACAATAGAG TAGGGTGGGG GAAAATGGGA TACCCTTTCA TTCTATTTCC TTGTTCCATT TAGTAGTAAA CAAAGACCTT TTCAGAGAAT TATAAAACCG TATTCTCACG ACTCCCACAG CCCTTTGTTA ATTATTTAAA ACATGATTAG AATATTTAAA TATAATGTCC CAAAGATGCC CCATCTTCCG CCACAGTACT ATACTTGAAA AATATATTGT TCTGCCCCTG AAATAGGAAC TTTAGGGGGA GATTTTTCTT ACGCACATGA TAAATTAATA TGTTGTTACC GATAAATTGT AGATACTTAA AATGAAAAGG TCGCAATTGT ATTTACCATT ATAAAACAGA AGATCGGTGT GTTTTGCTGG ACAAATATTG AGAAAATCTG TGGCGACAAC TGTGGTCTGA TTTACAGGCG AGTTGGACGG AGTTGACAGG TCGCGAAAGC GATCCCACCT TCGTGTCTGG GTTTCGAGGT GCCGCCCGTC GTGCAGTAGC AACTGTGCGG TCAAGTTGAG AGCAAGAAGA CACTACAGCG CGCTTTGAAG CGTCCAAGCC GCCCGCTGAG CAGGGCGGAT AGCTCGTTTG GCACCTCGTC TGGCATCGTC CGCACTGTCA ACCTTCTTCG TACAAACGTC CTCACCTGCC GCGCAGGATT GCTTCATATG GCAGACCGAG TTGAGTGGGA AATCATATTC TGGTTGCTTC GCTTATAGAG CTAGCTCACT AGAGACTAGA GTGTTGTGAA TGATGAATCA TTTGAATTAA GCATTTTGTT TAGTTGATCA AATGAGTTTC AGTTTGATGT TCAGGACTGC TAAGTAATGC AGTGAAAGGA ATTCTAAAGT GATTATATTT AGAAATGGGC TATCAGTGCT TGATTACTGT TGCAGGGTTA TTTAAAAATG CAGTCGAACA GTCTAAGAAA GCTTAGCTAT ATTTGAAGGA TTATGTATAC TTATTTCATT AGAGCAATAT TTTTTTTTTT ATTTTAGACT TTTGGTACAT ATTCAAAATA TCAAAATTCT CACTGTGAAA TATATTACTG TGATTACATC ATGACCTCCG TCGAGCCCAT GCTTTATCAA GGCAAGCACG CCGTTCAGAA AAATGAAGGT ATATATGCAG TCCTATTTAT ATTATAATTC ATCGCGGCAA TTGTTTCTCT TATAAAAATC AAACGCGATC ATTTTAAATG TTGTAAACAG AGCAGATGCC TTTGTAAATA TGCATCATCT TGTACCGAGA ATCCAGCAG