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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-trop

Organism: C. intestinalis
Dataset: JGI 1
Description: -3000:+200 region of ci0100148830
Promoter location: scaffold_244:33464-36663:+
Gene alias: ci0100148830

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
Ci-Bra Distal 1 bra Ci-Bra 35088 + 28 TCTCGCACCC
Ci-Bra Distal 2 bra Ci-Bra 35095 + 28 CCCGGCACCT
Ci-Bra Proximal 1 bra Ci-Bra 35153 + 28 TTTATCACTA
Ci-Bra Proximal 2 bra Ci-Bra 35163 - 28 CTTCACAGGA
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  • reported binding sites
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Sequence
GTCAGACTCC GATAGCATAC ATCTAACCCT GCTGACTAAG GATCCTGACA ACTTATTGCT TCTATGGAGC CAACACGGTG GCGTGGGAAG ATGGAAACAG GTTCAAATCA GTCTAAATTT CACCGGCTCG TCGAGGTTGC GGTTTACAGG CCAGGTTTTC CTAGCAGAGC AAATTCGGTC GCTATACAAT GTGTACCGAC TTCGAAATAT TAAGATCCTA CCATCATGTA TGATAAGCGG TCGGTTTTAT AATTCCCGCG GCGTATATAA ACCCGGCGCC TCGCCGTACT CAAATTTCAA ATGTGGCTGG ATAAGCCTGG ATTCGGTTTG GGTCCCGGAG GTACAACTTT CTATTATGAC AACGAATCGT AGTAGCCTTG ATTGGGAAGT CAAAGCCACG TTTATTTCCA ACACTGGGTT CAACGTATGC GTCTATAAAG CGTCGTATAG CAAGCACGGC TGGACGAGCA CTGACATAGC AGTGTACTGG GAGTTGAGTA AAGCTTCGAA CAGCCAATCT CTAAACTACA CAAAATCAAA CGTTTCGGTT TCCTCCGCTC CCAACAGTTG GAGCACAGTG GAACCAGTTT GTTCCGGTTC ATACCGGTGT GTACAAACCA GCATCTGCAT CCCGAATGGA CTTGTTTGCA ATGGTTTGGA TGATTGTCCT GCCGGGGACG ACGAGTTTCA AGCGTGTGGG GAAGCGACAT CTTTTGTCTT TGCGGTCGTT TCGGCATCCA CCGCCGGTGT ATTCGCCATT CTGTTCCTTT ATCTTTATTA CGTCAGAATT CAGTTACTCG ACAACGACAT CTACGGCGAG AATTTCGACT CCGAAGACCG ACGGTATATT GAACTGCTTG AAACTGCGAT CGCAAACACC AAATGCTCAA AGCGAGAGGC CAAAATCGCC GTGGGCGTCC ACCAAGACCG AAGCAGCATT GACAATAGCA GTCTGTGACA TCACAATAGA CGTGTTGTGT CTCGCGAAAC AAATAAAACG AAAATTCGCA AACTCTTAAT AAATGCATCA ATTCATGCCT GCTCTTTTTT CGTCACCTTT TATGGCAAGT TATATTTTTC GTTTTCAGTT TCCGTCCAAA CTACGACTTT ATTCGTTCGC CCACAAAGCA CTTGACCGGA TTGAACTGGT TAGAACTGGC TGCAGTTTTA CCTCGACAAG ACACTTCCAC AATAGGCGAG GTATTTGTCA TTTAAAAATC GTGCGTTTTT ACTCAATTAC CGCCATAAAT ACAACGTTGC TCTATTACGT AATCTTCAGA CGTGTGATTA TTACGTCACA ATACGCACAA GTGATCAAGA AGACGCCGGT ACAACGGCCC AGGTCTACGT CATTCTTACC GGAAGTGCGG GAGACAGCGG AAAAAGATGG CTCGTGACGT CATCGAATGG TGATGACGTC AGTTTCCGAC CGGGCAATGA ACTTAAGTTT ACATTCACCA GTGTAAACGT TGGCACCATA AAAGAGGTAT GTCACTGTGT TTTACCCTTA CACGAAATAC ACCGATCGTG TTTTTAAATT TTGAATTTCT CAGCTTGTGA TTGGCCACAA CGGACGTGAC GTCACATCCG GATGGCATTT GGATCAGGTC ACCGTCTCTT CGTCTCTCGC ACCCGGCACC TCTTTCGTGT TTACTTGCCA AAAGTAAGTA GTTCTCACGG GTTGGACGTT TTATCACTAT CCTGTGAAGT AGGCTTGGCA GCGCTTACAA CTTTGAACAC TGCTTTTATC TTACAGGTGG CTTGCAGATT TGGAGGGTGA CACTTTTATT GAAAGGATCT TACCCCTAGA TCACGTTAGT GATTTTGACG TCGCCTCCAC CGATACCTGA GCGTCATTTC CGTGACGTCA CACCTCCTAG ACACCGGTCC TTTATATCCA TTAGCAGTAT ACCTACAGTG TCATACATAC GTGCGTCTGT GAATACATTA CCGCTTCCTG CACCATAGCT TTTGTATTGT ATGATGATTA CCTGAGAGTG CGGCAGTACG TAAGGACCGC TTGCCGCGTT ATATCAACTG TTTCATTTCG TTTCTTCCAG CGTCACATTT CAACAAATAA ATTAATCAAC TTTCGACGTA TGCGAAATAT TTGCCGAGTT CATAATGGCT GGCGAAGTTA GTTTTGTATT ATATTTGATG AATAAGCATT CCGGTGTATT GTGTGACGAC TACTTCCTAG TATTCTAGTT GAGCTCGGTG TATACAACGT TTCTTTTGTT GTTATGGGAC GCACAAGTGT TCGGGGCTGT ACAGATTTCA TTATTCAGCC AGACAGAGAA ACGGAGCGAA ATGACGTCAG CTTTTAGAGC GGAATTTCGC TCATATGTTT TGCCTCAAGT TGCAGAACGT TCGCATTTTT TCATGCGCGA TCACTCGTGC GTGACTCATC TCTCCTCTAA AGTGATTTAA GAGCGAATAA AGCAAACCGT GTTAGGAGCC GCTAGCCATG AATGGTCTTG TTTTAGTTTC ACGACTTGAT ACAAATAGAG ACGCATTGAA ATTCAGCAGC AACAGTTAGT TTTCGGCAGT TGAGAGAGAT CCTGCAGCTG TAAGCTATTA AATGTAAGTT CAACCGATCG CTTTAAACGG AAAGTGCGTT TCAACAGAGC AAAACAGGAA GTGATATCAC GGTTTAATGA TTAATATGTG TAGGCTATTT TACTGTACAT AAGTTGGCTG GTGTGTTTAC AGTATCTTGT CACAGGTACG TCTTGAAGAG ACAATTGCGC GAACTTTGTC GTTTCGTCGC GGAAAAGTTA GTTGGCGACG TCGAACGGTT ACGCCCTGTC GGTGGATTCT CGTTTTTAAA CCAAACTTAC GCTACGGCTG ACTGGGTTAC TGCGGCCTGT AAAAGCTCAT AGGCGAGGTA GCTTTCGGAG TATGTACAAA TACGGCAAGT GAGCAGAAAT TTGTCGCGTT TGAGAGAATA GCGTTGGTGT AGTTTTTAGG ATGTGTCATA CGGTGTTGTT TCATTTTGCA GAGATTAACG TTAGTACTTG TAACTAAAAA ATACCACGAT GGAAAACATT AAAATGAAAA TAGCAAAGCT AAAGGCTGAA AGCGATGAAA AAGAAAATCA AATATGTGAC CTCTCCGACC AACTTAAAAA AGTAACAGAG GAACGAAAAC AGTTTGAAGA AGTCAATCGC AGTTTATCCA ACAAAATATC CACTAACGA