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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-MLC2

Organism: C. intestinalis
Dataset: JGI 1
Description: -3000:+200 region of ci0100146149
Promoter location: scaffold_180:89703-92902:-
Gene alias: ci0100146149

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
TATA TATA-box DNA polymerase 89948 + 1 TATAAAA
M2 M2 unknown 89981 + 1 TGATGACGTCATA
M2 M2 unknown 90012 + 1 TTCTCACGTCACT
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  • reported binding sites
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Sequence
AGAAATCAAG GAAGCTTATG AAATCTTTTG CCGAACCACT GAGATGGAAC TTGGATTCGA TCAAGTAGGA GATGTTTTCC GAGCCATTAA CCTTAACCCA ACCATTGAAG ATGTAGAGAA CGCTCTTGGA AACCCATCGA AAGAAGGTTT GTATTTTGTT AAGGCAAGAC GCTTCTCCGG CATAGTCAAA TACTTTAGCA TCTTAAGAAA ATTTTTGCTG TCTCCACTGG TTTAGATGCA CTTTAACGAA ATGGCTGACG CCTGACGATG AACAAGTTTA AACGCTATGG TAACTAACGT ACGATAATTC CTATAAAACA TGTTTATATC TTACAGATAT GGCTGCCAAG AAATTGAAGA TCGAAGAGTT CCTTCCAGTG TACACCAAAT TGGTTACTGA ATTCACTGAA GGCACTTACG ACGATATCCT TGAAGGTCTT CGTGTTTTCG ACAAGGAAGG TAACGGAACA GTTATGGGAG CTGAGATCAG ACACGTCCTT CGAACCCTTG GTGAGAAGAT GACAACCCAA GAAATCAGTG CTTGCATGGA CGGCCAGGAA GATATGAATG GTTCAATCAA CATTGATAGT AAGTGACCGG CTTTATGCAT AGCTGGTCAT TATAACATTA CTAACAACTG CAATCTGATT TATTCTTAGC TTTCTGCCGA TACCTCTTGG AAGAGAAAAA AGCTGAATAG GATGGCAAAG GGGCGGTTTA AGTAAAGGTA TGTGCAAAAA AACGAAATAC AGAATTAAAA TTATGCTAAA CTACATGCGA AAACAATATT CTTTTAAAAC TGTTTACTAA ATGCGTATAT ACATTAACAA TCACATTGTT TTTCAGGTCT TTTTAAATCA AGAAATCAAG ATTTAAATGG ATTTTCAAAA TCGACACGTT GCTTGTTTAT TTAATTGTGT TTATTCGTAA ATTATAATAA AATTGAATCA TTTGACATCA CTTTTGCTGC TGTTATGTTA CGATTGTAAA AGAAATGCAT AGTCGGTCTT AACATTACAA AAACATGTAA TAATGATTGG AATTATGTTA CTGGTGCTAG TCAATCAGTT TAACCTTCAA GGGTATATAG TTCAATAAAG TAATTGAGTT AATACGCTTC CAAACTTTCA ATTGCACTGA ATTGTGTATA GGATTAGGAC GGACACTATG CAGACATTGT ATTCGCTGTG ACCAGACTCA GATTGCGTAT ACAGTATAAG GGGGTAGATG GGACACCATC AGTACATAAT ATCCAAAATA TGAGCCACCA ATGTCGCCTT ATGTGTAATT GGGCATAACA GCCCTTAACT GTAATTTCTT TAACTCATTG TCATTTATCG GTTTTATAAA CTGTAAATCA TATATTATAA AACAGTTAGG TAAGGTAACT ATAGTAAGCC GGCACAAGCT GTACAGAATA CTCAGTCGTT GCCTCGCAAT GTGAGAATTA CTGCTGAGTT ACATTCATTC ATTCATTCAA CCGACCGGAA AACTTGAGCA ATTTGTTGCA CACTTTATGT TTATTAGAAT GATGTTTCGG TAACTGCAAA ACGTCACTAT AAACATAAAT GAAACTTTAT TAATTAGCTT GATGTGTAAA TTAACTTCTT CAGCATCTCT GGTCTAAAAT ATTCAGCTCT GGTTGTAAGG TTGGTTGTAA CTAGCGATTT TGACAATTCG CTTGTGACAA CTGTGTTACG GCCATTACCA ATAAATGTAT TGAACAGCGA TACGTATACG CCCGTCAGCA CGGGGCGTAT ATAGCAAAAC ACATACTACA AGCATCTACT GGCAAGCCAC ATATATACGT TAATTGGATT GTTATACTGA TTTGGAGTTT GAATGTGTAA CACAAACTGA TGACTCTTGT AATAGAGGGA TAGAGTTATA TACAATAAAC AGTCATGTGT TACGCATTTC CAAATTTTAA AACGCTCGTG ATCATTAGAT CTATTAAACT ATACCTACTA ATATAAGTAA CTTATAGTCA ATTAAATCTG CTATTATAAT AAGACAACTA AGAGTGCTGA TACCAAAACA TGTGATTGAC ACTTTGAGTC GATCTGGGCC TCAATCAAGT TTCGATAAAC GATTCTCAAT GTCACATACT TTCCGTATTC ACGTTCAACC AAGTTTCTTA TGTTAATAGC CTAAATGAAA AGACTCTCTG TATACATCTC TTGCAACAAT CCACATGTAC CTACATGTAG TTCTTTGGGG TAAAATGGAA TATACGGTTA GCACTTGAGC CCCATATTTC CTGATCGTGT TTTGTTAACA ACGTTCATTT AAAGTCGCTG GGCTACGGTT TTATAATTCT CCAACAATTT GTTGTTTACT ACTAAATGAA ACACAATAAA ACATGTCCAA TTTTAACTCG TCCTACTATA GAGGATCTTA ACTACGGTAA AGAGTGATCG TCTCGTAACT GAGAATGCTA GATTTAAATT TTAATGCTGT TGTCATTTTT GACGTGCCTT ATTTTTAAAC ATAATACACA GCGGTTATTG TTTTTACCAT ATGGTCACTT AATGGGTTTT ACATAATGCC AAACACGTAA GGAATACCCC GATGGTACAT ATTGGTAGCA TTATGAATGC TAATACACAA TGTTATTGTA TGGTGAAAAG TGAAGAACTT TTCACCATAC AATACACTTT TTAGTGTAAA ACTGTTTATA CAAATTTAAT TTCGAAATAT TTAAAAATCA TTTTCCATTC GCAAAGTGTG TAGTATCCAA GAACGTGACT AAATAAATAT GCGCTCAAAA CTTTACTCTT ACTTTTCGAG GCTCATGCTG GTTGCGTTCA AGGACCAGAA GAAACACATA ATCACCCGAC CAAAGCGAAA CAGCTTTGTT CACAACTAAT CAAATTTCTT CCACCGCCTG TTCTCACGTC ACTAATTCCG CCTGTCTATT CTGATGACGT CATATATCAG GTCATTATGT CTGTTATAAA AGCGCTGGGT CGAAGTTTAA CAGCATTCAG TTCTGCTTAA GCATAATCTA GCAAGCATCA AACATCCTTC AAGACGATAA ACTATTATAA TGGTAAGTGT AGTTGTATGC ATTGCTGGGG AAGCACCAGT AGTAATATAC CATACCGATA AAACTAGTTT AGATTGTTTA GAATTTTATG TAGGATAAGC CTAAAACTTA ATAACAACTG TCGATTTTGT CTACAGGCAG AAATCCCAG