Version 2.0
D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-trop

Organism: C. intestinalis
Dataset: JGI 2
Description: -3000:+200 region of ci0200290543
Promoter location: chr07q:5806646-5809845:-
Gene alias: ci0200290543

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
Ci-Bra Proximal 2 bra Ci-Bra 5807649 - 28 CTTCACAGGA
Ci-Bra Proximal 1 bra Ci-Bra 5807659 + 28 TTTATCACTA
Ci-Bra Distal 2 bra Ci-Bra 5807717 + 28 CCCGGCACCT
Ci-Bra Distal 1 bra Ci-Bra 5807724 + 28 TCTCGCACCC
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  • reported binding sites
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Sequence
CTTGTGACGT CATCATTGGC CGATTGGGTA AATAACGAAT CGAGTGAAAA AAATTCAAGC AGTTTTTATT TGAACATGGA TGCATGTTTG TTTCACAACG ACCCGTGCGT GTTTTCCTCA AACAAAAGCA AGGTACTGCT AAAAAGTGGT AAGCAGGACT TAAATGCAAG TGAAAATAAA TTACCGCACT TAACCAGCTA CTGGAGTCGT CTTGATTTGT ACAACAACCA ACACCTATGG TCGGTTAACG TGGTACAGCA TACATCGTTA CCCACAATGC CGTTTACACC GGAAACGACG CAGGAAACGT CAAGTAAACA CATGAGTTTG GAAACCGAGG TTTTAAAGTT TAAACAAGGT AGTAGTCTGC CGTGGGAACC GGTTCCGCTT CCGCATTCAC AACTTCTGCT TGTCCCGTTA CGTCATTTCG AGTCTGAAGC TTTTATTTTG AACGGCCTCT TCTGTCTTCA GTTCCGCATT AAATCAAACA GGTACGTGTC AGACTCCGAT AGCATACATC TAACCCTGCT GACTAAGGAT CCTGACAACT TATTGCTTCT ATGGAGCCAA CACGGTGGCG TGGGAAGATG GAAACAGGTT CAAATCAGTC TAAATTTCAC CGGCTCGTCG AGGTTGCGGT TTACAGGCCA GGTTTTCCTA GCAGAGCAAA TTCGGTCGCT ATACAATGTG TACCGACTTC GAAATATTAA GATCCTACCA TCATGTATGA TAAGCGGTCG GTTTTATAAT TCCCGCGGCG TATATAAACC CGGCGCCTCG CCGTACTCAA ATTTCAAATG TGGCTGGATA AGCCTGGATT CGGTTTGGGT CCCGGAGGTA CAACTTTCTA TTATGACAAC GAATCGTAGT AGCCTTGATT GGGAAGTCAA AGCCACGTTT ATTTCCAACA CTGGGTTCAA CGTATGCGTC TATAAAGCGT CGTATAGCAA GCACGGCTGG ACGAGCACTG ACATAGCAGT GTACTGGGAG TTGAGTAAAG CTTCGAACAG CCAATCTCTA AACTACACAA AATCAAACGT TTCGGTTTCC TCCGCTCCCA ACAGTTGGAG CACAGTGGAA CCAGTTTGTT CCGGTTCATA CCGGTGTGTA CAAACCAGCA TCTGCATCCC GAATGGACTT GTTTGCAATG GTTTGGATGA TTGTCCTGCC GGGGACGACG AGTTTCAAGC GTGTGGGGAA GCGACATCTT TTGTCTTTGC GGTCGTTTCG GCATCCACCG CCGGTGTATT CGCCATTCTG TTCCTTTATC TTTATTACGT CAGAATTCAG TTACTCGACA ACGACATCTA CGGCGAGAAT TTCGACTCCG AAGACCGACG GTATATTGAA CTGCTTGAAA CTGCGATCGC AAACACCAAA TGCTCAAAGC GAGAGGCCAA AATCGCCGTG GGCGTCCACC AAGACCGAAG CAGCATTGAC AATAGCAGTC TGTGACATCA CAATAGACGT GTTGTGTCTC GCGAAACAAA TAAAACGAAA ATTCGCAAAC TCTTAATAAA TGCATCAATT CATGCCTGCT CTTTTTTCGT CACCTTTTAT GGCAAGTTAT ATTTTTCGTT TTCAGTTTCC GTCCAAACTA CGACTTTATT CGTTCGCCCA CAAAGCACTT GACCGGATTG AACTGGTTAG AACTGGCTGC AGTTTTACCT CGACAAGACA CTTCCACAAT AGGCGAGGTA TTTGTCATTT AAAAATCGTG CGTTTTTACT CAATTACCGC CATAAATACA ACGTTGCTCT ATTACGTAAT CTTCAGACGT GTGATTATTA CGTCACAATA CGCACAAGTG ATCAAGAAGA CGCCGGTACA ACGGCCCAGG TCTACGTCAT TCTTACCGGA AGTGCGGGAG ACAGCGGAAA AAGATGGCTC GTGACGTCAT CGAATGGTGA TGACGTCAGT TTCCGACCGG GCAATGAACT TAAGTTTACA TTCACCAGTG TAAACGTTGG CACCATAAAA GAGGTATGTC ACTGTGTTTT ACCCTTACAC GAAATACACC GATCGTGTTT TTAAATTTTG AATTTCTCAG CTTGTGATTG GCCACAACGG ACGTGACGTC ACATCCGGAT GGCATTTGGA TCAGGTCACC GTCTCTTCGT CTCTCGCACC CGGCACCTCT TTCGTGTTTA CTTGCCAAAA GTAAGTAGTT CTCACGGGTT GGACGTTTTA TCACTATCCT GTGAAGTAGG CTTGGCAGCG CTTACAACTT TGAACACTGC TTTTATCTTA CAGGTGGCTT GCAGATTTGG AGGGTGACAC TTTTATTGAA AGGATCTTAC CCCTAGATCA CGTTAGTGAT TTTGACGTCG CCTCCACCGA TACCTGAGCG TCATTTCCGT GACGTCACAC CTCCTAGACA CCGGTCCTTT ATATCCATTA GCAGTATACC TACAGTGTCA TACATACGTG CGTCTGTGAA TACATTACCG CTTCCTGCAC CATAGCTTTT GTATTGTATG ATGATTACCT GAGAGTGCGG CAGTACGTAA GGACCGCTTG CCGCGTTATA TCAACTGTTT CATTTCGTTT CTTCCAGCGT CACATTTCAA CAAATAAATT AATCAACTTT CGACGTATGC GAAATATTTG CCGAGTTCAT AATGGCTGGC GAAGTTAGTT TTGTATTATA TTTGATGAAT AAGCATTCCG GTGTATTGTG TGACGACTAC TTCCTAGTAT TCTAGTTGAG CTCGGTGTAT ACAACGTTTC TTTTGTTGTT ATGGGACGCA CAAGTGTTCG GGGCTGTACA GATTTCATTA TTCAGCCAGA CAGAGAAACG GAGCGAAATG ACGTCAGCTT TTAGAGCGGA ATTTCGCTCA TATGTTTTGC CTCAAGTTGC AGAACGTTCG CATTTTTTCA TGCGCGATCA CTCGTGCGTG ACTCATCTCT CCTCTAAAGT GATTTAAGAG CGAATAAAGC AAACCGTGTT AGGAGCCGCT AGCCATGAAT GGTCTTGTTT TAGTTTCACG ACTTGATACA AATAGAGACG CATTGAAATT CAGCAGCAAC AGTTAGTTTT CGGCAGTTGA GAGAGATCCT GCAGCTGTAA GCTATTAAAT GTAAGTTCAA CCGATCGCTT TAAACGGAAA GTGCGTTTCA ACAGAGCAAA ACAGGAAGTG ATATCACGGT TTAATGATTA ATATGTGTAG GCTATTTTAC TGTACATAAG TTGGCTGGT