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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-Pax6

Organism: C. intestinalis
Dataset: JGI 2
Description: -3000:+200 region of ci0200292302
Promoter location: chr09q:3317932-3321131:+
Gene alias: ci0200292302

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
UB unknown unknow 3321280 + 47 GCATGTTTTG TTTATTTTTC GGCGGCAACT ACGTTAGGTT ACTGTCATTT TACGAGCGAG GCTGAACGAC AAAGGCTGCC GCAGCGATAT TGTTTTTTAA TACTAATTCT CCGCTTTGTT TCGGGGTCTT AATCAATACA TTACGGGCTC CCTATTCAGG TATTGTTAAC CGATTCTTTA GAGCAGTGAT GCCATGTAAA AATATTTAAA ATCCTGATTT TGTTTATACG
UA unknown unknow 3321842 + 47 CTTTTTCTCC GGGAACACTG ATCTACACCG AGCAACAACA ATAGCCACCG AACCTTGTTC CCACGATGGC CGAGAAAAGG AAAAAAGCGG GGGGATTCCC CGATTACGTA TATAGTAGCA TCGACGAAAC ATTTCTTGGA TTTTGGGAGC CGTCGTCATC CAAATTACTC CAGCAAAATA TTCAGGAAAA TTTAAGTCTA TACTGAAGAG
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  • reported binding sites
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Sequence
ATTACCATTG CTCAATGCTT TACTTTTCTT AACAAACAAA ATGTTTTTTA TTTTAGATCT TCGAAAACAT GTTAAACCCA GGCCGCCTCT ACATGACTCA CATGATAAAA CTATCGACAC AGATTCTGAA GATACCACTG CTAACAGCTC AAATTTGGAG ACAACAAATG ACAGCATAGA CCTTTCAACA AGCAGTTCGA ATAATGAAAA ATCATTCGAT GAAAAGTCCA ACAAAGACAC CAGTAATATA TCTGGGAAGA AAAATTCACC AAAATCCAAG TCTGCAAGAA AACTGCCCAG AGATGAGAGA TATAACACTG TTGAACCTAC AGCTAAGAAA GACAAAAACT TTGAAATTTT CCTCTTGGTC ACTCTTATTC TTGTTGCTGT TGCAATCGCT TTTTACTATT TTAATTCAGT AGAAACAGAT TCCCACTCTG AAAAAATGGA AAAATCTAAC ATGGAAATAT ACAAGGAGAA AATGCAGAGT TTACAGAATG AGTTTCCTTC TCAAAACAAC AAATTGTGGA AAATTGTCAG GTAAATATCT TCAGGTAAAT ATGATCTTAT GTGATGTGCT TTATCATTCC AGAGTTGCCA TGCAAGAACA CCATGATAAG AAAGATAACC TCCAACCTGC TGTGTTGATG TTAGCATCCA ATGCTGATGC GAATCCAACC ATGCAGTGTC TTGCATCTAA ACTTGCTGAT ATCTATTCCC ATAATTGCTC ACAACCTAAA TTTGTGGTAA GACTGAAGTT ACTTTTTCAT TTCATATGTA CATCGTAAAT CCTAATGGAA TTAGAAAATG TACATGCTAT GCACGCCCAT TTTAATGATA GCACAGTGAG CCCTTGCGAA AAATAACCGC CTTGCATGCG CGAGATCTTG TCAAAACTTC CATATTCTGC AGACTTGTGC CCAAGTTTGT TTACTCGTAG CGTGTTCTTA AAAGCTGTCA TTTTGCTGCT AATTTCCTTC CATTTTCTAT TTTAATTAAT ATTTTTTGTT ACTGTATTCG AAGAGATAAA TAAAATTTAT GCTATGTCCA TCCAAGAATA CAATGATAAT ATTTTATGTT CTTTTTTAAC CCAGAAAATT TGTATCTGTT TTTACAGGTC CCTGAAAATG AGTTTAAACA CTTGTCACCA GAATCTGCAA AAGTGTTGCT TGACAACAAA ATATCATCAC AATTTCAAGC AGGATCATGT GCAAGTGTGG TCCGGCATTT TGAATTAATA CCCCCAGCTG CCACAAAAGT TTTCTACCAA TTCTGTGAAA ATGATAATGC CCCATACAAA AACGTGGCAG TCATTCTAAC ACTACAGGTA TGTAATGTTT ATTGTCATTG TGAATTTGTA TTGGTGCATG GACGGCAAAC AAACGAGAAC TAATGACTCT ACAAACCAAT ACAACATGCT ATGTTAAGAT GCCTTCATTA TAATCAAACT GCAAAGTTGA AAAACAGTGA AACAACACTG TCTTTGCATA TAATTCTCAA CCTTCAAATG TTAGAATACA ACCTTTGAAA TTAAACCAAA CATGCCAATA TTTACTTTTC AAGGCAACAG TTAATATTGG CTGTTACAGT TCAGTGTTAG TCATATTTTT AATTAAGAAG GCTTTCAATG TAAGTGTATA TATTCACATT GTAATACTCC CCAATGTCCA CATATGACAT ACATTATTAT TAATAGTAAT GCAATACCGA CATTAACTCA ATCGCATAAA TCGTTTCAGG TAGAACCAGG TGATTGGAGT AAGCCATACC CAAACCTTGA CAATCTACCT CCAAAATTCT GGGACCGAGT CGTTGACGGT TTCCTAACCC ATACATTGGC CACTGGTGAC CCAGTCGTCA TGACAACTGA TATGATTGGT GGATTATTAT CGCGTATTAC ACCTTCTGTT GTTTGGGTGG GACGGGAAAA CGACTTACAT TGTTAAGATC TTCACAACGA AAATAATAAA AATATATTTT TTCACCTGAA GCAATTAATT TTTTTCTATA AAGTTCGTAT TGTATTTTTA ATATGTAATT GTTGTGTGTA GTGAGTAGTC GATACCTAGC GTTACCCGTG TGTCGTTAAC AATTTCTATA TACATGTGTG TTGTGTGTGT GTTGCAATAA AATTAACCAT ACAAAATCGA ATAAAGGCTT CTGACATTTT TGAATATGTA TTATGTTTTG AAATCAATCA AGTTAAAGAA TAAATCCGAG AATAAAGAAT GGGTACATGG AAAAAATCAT GACAAATAAC AGGTACAAAT GTTCGACGAA AAGCATCTGT ATGGCCACTT TTATACGTGC TTAATTATAC AGTATTGAAG CCCACACAAG GCAACGAGAA ATGTGGGAAT TTAAATCCAC AGCGTCAATT ATTTTGGTTA GCCGACGTCC CCCGCTTTTC GTTTATTCCC GGGGCATGTA AAACGTCGTC CTTGCAACAC ATTGCAACTG TACAAGGCAG TTTAGATGAA GCAACGACAA AGCTACACTG TTTGGATGAA CTCAGTGTAG GATTATATTT GTTTCTTCTA CAAGAGTTAA AGTTAAGTCA TATTGCTATT CTTTAGGATT TTCCATTTTT TTGGTTTGCA CCTCGTTTTA ATATTTTGTT GTCGTGCACA TGTGTATGTG CATTCGTTAT ATCATTTTTT GTCTATTGGG GTTTCTTTAA CCTGCGGGGA CAGTAACATC CCGCAAGGGT TTCTCACCAG AGTAGAAACC CACTACCATT GGCTGGGGGC TTGTCGTGCC GTAGTGGCGG CTTTCCACCA ACGCCAGCCA CATAAACTAT GAATCATTTT AGTTCTGATA CTTTTTCGGA CTGCAATTAA TTTCTCGAGA CTATTAGCGA CTGCTGTAAT ATTTTACACT GTTATAATAA TAATGGTATC TTCTCGTTTA AATGCACTAA AATAATGCAT AAAGTTTTGA ATATTTTTTA TGACAATCAA GAGAATATTA AACAATAAAT GCGTGAATTA TGAAATTTAG ACACGTGGAA AAACTATGCC AAAGAACAAG AACAAGTATT CGGCGAAAAA GGAAATGACG ACGTACTTGC TGAACTGGAT GTAAGATAAC GTTGGATGTT GTCGGTAGGT GGTGTGAGAG AGCGATATGG CAAGCTTCAT TTATATTTCT CAATATTTTT CCACACACGT GACGCGTCCG TCAGGTATTT TAAATTTAG