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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-multidom

Organism: C. intestinalis
Dataset: JGI 1
Description: 1.1 kb downstream of ci0100137181
Promoter location: scaffold_489:36705-37804:+

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
T8 T-box unknown 36789 + 44 TAACAC
T7 T-box unknown 36825 + 44 TAACAC
bra2 bra Ci-Bra 36870 - 44 TCACAC
T6 T-box unknown 37038 + 44 TCCCAC
T5 T-box unknown 37243 + 44 TTGCAC
T4 T-box unknown 37288 - 44 TTACAC
T3 T-box unknown 37504 + 44 TACCAC
T2 T-box unknown 37515 + 44 TTGCAC
T1 T-box unknown 37529 - 44 TGACAC
bra1 bra Ci-Bra 37711 + 44 TCGCAC
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  • reported binding sites
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Sequence
AATACGGATC GGTTTCTTTT AAGCAAGTTT AATGGAACTA AGAAACTTTT TGTATAAATC AAAACATCGA AACGACAGTG TATATAACAC AATGTAAATA AAAAAACCAT ACATATACAA TAACACAATC ACCTGTACGT TTTGAAACTT GTAAGCTGGC ATGAGGTGTG AAACAACACT CAATATATTA ACTTGATTAA AACAACGAAG ACATTTTTTC AGCAGTAAAA CGACAGTTGT TAAAACATAC TATGGGCATA AAAACTTCTT GAGTTAAATA TATAAATAAA AGCGAGGATG GTAAACTTAG ATAATATTAA TCAGGTCTAA TATTCCCACC AATATAATTC GATTCACGTC AAACTTTGCC AGCTATGTTT CGTCTTAAAC GATTAATGCA ACTTATTTAC GTCATTTAAA TTCCTATAAG TGTACCTGCC AAACCACAAG TCATATTTCA GCCTCAGATT AGTAAGACTT ATACCGCGTT TGTTTATTTC GCTACCAGTC GGATTGAAAT GCAATAAGTA AGAATCTTTT GCACGGAATC TAAAAATAAT TGCAAGGCCA AAACAGTCTT GACGTGTAAA TGACGTCAAT TAGTTATCTT CCAAAACAGA ATACGCCGTG TATGATTAAT AGCCGGACAA TGGGGATTAC TTGGAAGCCG TTACAAAAAA TGCAAAGTCG ACATTATTTT TTAATCGTTC TATAAACAAT ATAAAAACAA CATCTATATA AAGGTTCGTA TGGGATAGTT ATTATGTTGT CTATAAACTC ATATATTTGG AGTACAAACT ACCACGCGGT TTGCACCAAT AACAGTGTCA ACCTGCATTT CCAAGAATTA TATTATTGAA TTTTAAAATA AACGCATTTC GAAATTTAAT ACAAAACAGA ATTTCCCAAA TTGGATTAAA TTGAATAAAA AACACTCATA GTTTATGAAA CTTAATATTT GTGGGTAATT GGGGACCTAC AAATAATTGA ATTAAGAAAT CACGAATCGC ACCATGTTGT TAAACTTTGG AGATTACTAC GACGAGAAAA ACTTTTCAAG TCAGCTACAA CTTGCAAGAA AGTTACGCGG GTATATAAA