Copyright © 2005-2008, Human Genome Center,
Inst. Med. Sci., Univ. Tokyo. All rights reserved.
Version 2.0
D B T G R
DataBase of Tunicate Gene Regulation
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Genome region
eg: chr09q:3065382-3068581, ...
C. intestinalis
1.0
C. intestinalis
2.0
C. savignyi
1.0
C. savignyi
2.0
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About DBTGR
Ci-GnRHR3
Gene:
Ci-GnRHR3
Ghost cluster: 716
Reference:
Kusakabe, T. (Unpublished).
This construct is available from Prof. Kusakabe.
Detected expression
Expression was detected in
notochord
,
mesenchyme
,
neurons?
.
Construct description
5'-end primer with a SacI restriction site:
CAA
GAGCTC
GGTTAAGCAAACTGTTAGCG
3'-end primer with a SmaI restriction site:
CAA
CCCGGG
AGGTTTGACTCACTAACAAG
Vector: pBluescript-EGFP
Insert size: 5740 bps
Insert sequence:
GGTTAAGCAA ACTGTTAGCG TGTGAAAGAT CGTTATTTTA TCAGGTGGGG AAAGGCGTAA GTTTCTCTCC GAAACTATAT GTACAATGCA CACAGTTTTG TGTGTTTACC TTTTCAGTTC AACTTAAGGG GAAAAGATAA ACCGTTGTTA TAGAAATTGT TCAGGGCAAA CGGATTTACG TTCGCAAGCA CGTGCGAACA TTACCGTACA TTGCTGGTTA GTGTTAATTC ACTGTGAAGG TACTTTTTAC CTAAAAGTCA ATTTGCTTCG CAAGTTCTTC GTAAAATTCT GTTTTGGCAG CCTTCAGGCA ATTATGTCTC AACGAAAGTG CTCAGGTACT GCAGGAATTG GTTGACTTAT AATTCGTGGG ATTAGATTAG AGGCGACTGC GTCTTTGCCT AACTTGTGCC AGAACATCGT GTTGTTTGCG CGGGTGCTGG GCGACCCTGA AAGTTTTATT GTATAAGCTG ACCTACTTAT GCTGATACCC TGCGTAGAGG TAGTTCCTTA GTCATTCCGG AGAGCTGGGC AGTTTTAAGA CATGAGAGAG ATTGTTTTCC TGCTGTAGTT TTGCCGCCAG GTTACAGTAA AGTCTCGGTG GAATATGTGT TCGTATTTTC CCTTCTAAAT CGTTAGTTGA TGCTATAATG TATGGATTAA TCTACCCTAC AGCGCGCATT GATTTTTTAG GAGAGAGTTC AGTGTTAAGA GCCGACGTTT GGAGTGCGTT TTGATGTCGA CTTAATTCCC ATTAATTGTT CGTTAAAAGT TAAACTTCGA GATCGGTTCC GATTTTAAAA GTTGATCGTC GATTGAAGAA AACACCCCTG TCGCCTTTTA ACGATAACAC GTTGCATATG TCACCAACCC CGAGTTTTCA CTAAGTGCAG TATTATGACA TGTTATGGCA GCTTAAAACT TTGCCTTTGG CTGTTATTAA ACATACGGTA ATCATAGGCC CACTGGTCAG AAGGAGAAAA TCCCTTCCCT GTGTTTTGAT TGGCGATAAA ATAATAATTC AACCGTTAAA TTATTTTTCT TTCACATTTT TCATTCGACG CTTCTCCCTG ACGTCACACA ATCCAGTGTT TATTTAAAGC TGGTTGCTGA CGTCACGATA CTCTTTCAAT ATCGTGTGTG ACGTCATCGC GACCTATAAA CCGGCCAAAT CAAAATTTCA TTATTCGTCG CGCGGCCTGT ATGCAGTACG TTACTTATCA TGGAGAAATT GTCGGCTAAG AAATTCAATA CTCCGCGTTT AGAAAAAAAT TCCGAAACCT CGCACCGCGA TTATGATGTA ACATGTCTTT TTATACACTG TTCTATGACT CGTCATGGTG CAACTTTTAC CGCTATGTTA TTGGCGCTAA GTACAGCGCT ATTGGAACGT AACGAAGCGT TAAGTCGTCC CAACCGCAGT GCTAACTCAA TGACTGTTCA ATGCGGATTT TTAGTAAGTA AGCCATCATG AGTGAAGCGC CTTTTCTTAG AACGTGAATC TGATTGATTA CACAACTGTA ACAGTAGGGG TTCAAACACG GTTATTTACA TCATAATTTA TTGAAAAAAA CAAAAATATT TTTGTCTTAA GTTAGCGTTT GCAGTATTTG TCGTATACAA ATGGATATGA AATCGTAATA AAACAGTTTA CAATGTGTTT GTGCATGCGC TTTAGCAGTT CTGCTGCTCC CATTGTCTGG CCACTAGACT TTGTTTAATA TGCCATATAG GTATATTCGG CTTATCCATA GTCTATCGGC TTAGACTGTT AATACAAATG TCGCAATGCA GAGCGCAAAC ATATGGGCAA GTATATGTAC AAGGGTCCAA ACTCCACACA AAGTGCATGA ACCATCAGAT TATGTTTATA TTTTCAAAAT GTAATCGACA TAATTAGTCA AATGCTTTTA CGTTAGTGTC GATTCTGTAG TTTTCTCAGT CTGTTTCTTT TTCTTGTACA AACTATTTCA AGAATGTTTC AGTCAAAGTT GTTATCAGTA GTTTGTAATC TGGAATGAAT TATTTAAACA ACTCTTGTTT TTAACGCGCT ACTCGCACCC GAATACAAAT ATTACAGCGA TGCCCGCAGC ATTGGGAAGC ACCACGGCGA AACAAAAAAG CTGTTCGCGA ATCACGAACG AAAATAACTA TGAAAGACAC AGATGAGGTG TTGTTCTTAT CGCATGGCAG CTTTGGTCAG TTGCCTAAAG TGTCAATTTA CAAGGGTCCC CTGTTGCGTA AATGCCCAAG GGACGAATTA TCTGATTGTA AGGGATCCCT TGTCACAAAG CAGACCAACG TAAGACTATG TGGCGAAAAA TACGATTTTT CTTTTTGAGC GCGACAATCT TAATAAAATG AAATAAAATA ATACAGTACT GTGGGGGAAG ATGGGACACT TTTAGCACAT AATATTCAAA TTTCCTGACC ATGTTTTAAG CAACCAACAA CGGTTTATAG GAGTCGTGAG AATAGGGTTT TATAACTTTT TGGATGTTCT TTGTTAACTA CCAAATGAAC TGAGAAAAAA GAATGAAAAG GTGTCCCATT TTCCTCCACC AAACTAAACG ACAAACGTCA TGTTATGCAA AAAAACGTGC TTAATTACCC GTTAATTCCT GTATTTTTAC CGCTAATAAA ATGGATTTCT TCGCTATATG TTAGACAATT AAACACCGGT AACCACAAAA CAACGCAGGT CTGGTAAATA ACGGCGAAAC CCGGTCTGTT ATGGAAAAAA TATACAAATG ACTTATCGGT TAAAAGGTAT GCCCACGTGC GTCATCAACA TTATTTTAAG TGGTACGTAC CAACGGAACT CTCTTGTAAG TTTTGATAGC GATTTCAGTT ATCTAATGTG TTTACATGTG CAGCTTACGG TCGATTATTA TGTGCGCCCA AATCGATAGC GAGATTAGAG AAATTATTAA TTAATGTCAC AAAACGACCT CGGTTCAACA AATGAATGGG ATTCATAAAC AATGAAAACC GCGGGCCATC CTATCTCTCA CGAACATCAT GTGATGATAT TTTGCAATCT TAACGACCAA CTACGACGCT CTTATCGATA GTAATTGTTA CGTGATTATA ATCCATCATG CGCGGGTCAA AAATTCTCCG CAGAGGAAGC AAGTGTATGG AAACATTAAC AGGTGATTTT AAATGCATTC AACACCTTGC TTAATGCAAG CCTTTATGCG TTGTAGTTTA GCAGCTTTGT TGAAAACCTC CCCCCTTAAC CCCTTCTTAC TTTGATCGTA ATTACCGATA CCGCGCGGTT CAAACTCGCA GCTCGTTTTG GACTTTTGGC GATGCCTATC TAACTTTCAA CGTTAATTTA TTAGATTTAG ATTTTGGCCG TTTTTCCCTA TAGGTTTCCC AGTAGTCTAT ATTAAGCGGA CAGCTCAGTA CAAGTTGGAG TTGGTAAAGG CAAGCAACGA GAGCAAACTT AAAACTGCAT GCAGGGCAGA TTGAAAGCAA TAAACGTCCA AGTCAGCAGT CATGATTCAT GATTGCCCAT TAAGCTGTAT TTATTCTGAA CTATAAATTC AAATGTCCTT GCACGGTCAC CTCTGTTCGG TATACTTAAT GCATTGCTGC ATAAGCGAGT TATTAAAACA GGTAAGGTCA CAGCTATAGA TTAGTCCAAG AGAATGTGTG ACTCGTACCC TGTGACACGG TCCGGTTGTC GTAAATAGAT GCTAAGTGCT AGCTGGTCGA TGTAGCATGT CTATACGTTA ATCGAGTTTT TGATTTACGT CCAATTTTAA ATTTTCATGC GCGTTGTGCT GCTGGAGTGT TCCCAATGCC GAAATCGGGG TGCTGGGTTG GTCTTGTCGG AAAACGGTAG ACGGGCATCT AAAATTCATG AGTGTTTGGT TTCGCTGTGG TCTTCTTCCC GCTTTCTCTA CTGTCTTGTC CTATTGTCAT TGAGCGCATT GTCTCGTAAC AAATGGAAGA TTCTGGATTA TCGTATCACA TATAGTCACT TGTTGTCAAT TAACCTTTTA ACAAGGGTTT AATGATTGGA CAGCTTCAGT AATGCGATAT TGCAACACCG ACAATTGCCA GCTTTATGAC TTGAAAATTT ATTATACAGT ATATTATAGT AGGGTGGGGT AAGATGGTAC AAGTTTTAAC ATTTAAAGAA TTTTGTGTTC GTATGACTCT AAAATAGTTT TGCTAATTGT AAAAAAAATA TGAAAAAAAC ATAAGACATT CTGTTCTAAA AGTATCCCAC TTACTTATAT TTATAAATAC ATGGACTATA ACCTTGATAG ACGCAACGAC ATCTATTGAC TCGCCCGGTA GCGCAGCGCA TGCGCAAAAC AAACAAGTTA TGTGTGGTTA GTGGCCGATC TAACCTCTTC GCTTCGGATC ATTAATGTAA TTTATCGCTA ATTGATTAGG CGCGAAGCAA CTGTAAATTG CGGCATAGGT TACACCCTTC ACGACTCTGT TTTGCTTTTT TTTTTTGGTC CTGTTATGCG ACCAATACGC AGGCATATTA TTATTATCAT GAGACAATAC GCAGGCATTA TTACCCCAAG TGCCGGGTGC TGCGTTCCAA GTAACAAAAT TTCGTTGTTT TCGGTGCATT TTATTTTAGT TTGAAAATCA AAAATTCCTG TTATATTTTC TTCCTACTAT TTTTGTCTCG TTTATCAAGC GATTTGTCAT ACAGATTAAC CTTACTGTTA AATTTATTTC AATCATTTTT CAAAAAATTT GGAAGCGTGT TTTTAAAAAC ACTGTAATTA ATAATCGTTA TAAACATTAG CGCTTGCATA ATTGCCAAAA AAAATGATGG CATAGCGATT TTCATACAGC AAGTTCAGCG TACGCATTGC TGTACTGCGC CAGAATCAGA ACTAGTTAAT AGAAAGAAGT CCGCCATTCA GGAAGCAATA CCGTCGCAGC AGATTGCGCG TGCCATTTTA GCGTATCAAC AGCAGCGTCG AAAACAGAAA CAATCATAGC AGAGCGCACT AATGAAAGGG TGCCGTACTC GCGTCGTGTT TTTCAGCTAG GTGCAGAAAC GGTTCTTTTG CATGCATAGC AAAGCAGAGT TCAGTAGCCC ATAGTTATGT CTTAGGTTAC AGTTTCCTTT AAAGCCGCAG TTATTATTCA AGCTAGCCTT CAGGCGAGCT GCTAAACCGT ACAGTCTACG CGCCTTATTA ACACATAATA GAATAATATT GCGGTATAGG CCTGTACTTT AGAAGTGCTT GTTAACTGGA ATACACATAA TAGGTTCAAA TCGGTTTCAG AGGATTGCGT TTAACTACAA AGTACAATCG TGTTTCTACA GTCAGGAGTC AGTATACGAA AGATGAAAAG TGTCTAGTGT CAAGGCTTTA TATATAAACG AATTGAACTG TATAGATGTT ACTACTAAAT GGCAATTTAC ACAATTATTG TGAATTGGTT GAACATTTCA ATACAGTCAA ATATGTTACA GACGCTATGC GTTGAAGTTA TGGTACAGTT TAGTATTGTA ATTTTAACTT GAATATGACG AAGCTATCTT AAAGGTTCGG CGCAGTTTGT CAAAAAAATA TTTATATATA CTTAGAATCA CAGTTTAGTA GATTTAGGTG TTCGACGAAT GCTGTTTAAT CAACAAACGT TTTAAGAGTA TGTAAAACTC AAGACAAAAC ATTGTTAATG CATTTTGATT TTAATCATCA CTTTACTCAT GTAGGAAACC TGTCATAAGA CTTGTTAGTG AGTCAAACCT