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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-Sna

Organism: C. intestinalis
Dataset: JGI 2
Description: -3000:+200 region of ENSCING00000008903
Promoter location: chr03q:4125286-4128485:-
Gene alias: ENSCING00000008903

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
E1 E-box unknown 4125695 + 29 CAAATG
E2 E-box unknown 4125725 + 29 CATTTG
E3 E-box unknown 4125817 + 29 CATATG
E4 E-box unknown 4125839 + 29 CACCTG
T2 T-box Ci-VegTR 4125895 - 16 AGGTGCCAAA
Macho1 macho1 Ci-macho1 4125924 + 15 GCCGCCCGCTG
E6 E-box unknown 4125982 + 29 CAACTG
Macho1 macho1 Ci-macho1 4126001 + 15 GCCGCCCGTCG
T3 T-box Ci-VegTR 4126031 - 16 AGGTGGGATC
E7 E-box unknown 4126085 + 29 CAACTG
Macho1 macho1 Ci-macho1 4127558 - 15 GACACCCGCGG
Macho1 macho1 Ci-macho1 4128003 - 15 GCCGCCTGTTG
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  • reported binding sites
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Sequence
CTGTTTAAAA CCGGCGTTCT GTATAGCGCC TATCACATTA CCACGCCTCG TGTGTCTTTA CCCAAGAGAC GTATATTTCA ATCACTTAAC GGCTTAATTC GAAACCGAGC AAGTGTTATG GTTAGATACG TCATGTTTCT AATGCAAGGG TATTTTAATC TATATCTCTA TATACTATTA ATAGACAATC ATTATTCCTA TGTAGTTAGA ATTTCATCAC ATTCAGTATT TTATTTGTAT ATAAGCCATC TTTGATTTTA AAATAATTTT ATTGCCGCCT TAGCCGAGAG CAAACTAATA ACTGGACTTT AAACGATACG TCACTCGTTA CGGAGTTTTT CCAGACTATA TTAAAGTGAC GTCAGTGAAA TGAATGCATG CGCGTGTCGC ACTTTGTTAT TTAATGACGT AATCTTGATG CGGCCACATA GATTAATGGG TGCACCGAGT ACTTTCATCA TACCAGGCGT CCGGTGCCGA AGCAACAGGC GGCTAACCGA AATAGAACAA CGACCAGCAG GAGCGAGCCA ACAACTGTTA CCGAAGCGGT CCACTTAATC CCGGGACACG CGCGAACTGT ACGCGACAAA TATCAAAATA TAAACAACGG CATTCAACTA TTAATATTGC GCCTTTGGTT ACGTTCAACC GAGTTTTAAA AACCTGTCAC ATTTTTAAAC TGAAGGCTGT CTGTATAGTC ATCGAAAGAA TATCCCACGA CCCAGCGTGC ACACTTGGCC CGTATAACCT TCTGTTTGTG TTGGTTTTTA TTCCGAATAC TCCAAATGAT TGTAGCGCCG GGATACCTTA GTTGGCTTAG TACCGATAGC AGACCGCCCC TCCACGAAAT ACAGACACTC TGTTTGTCAC CAGTGTTCTA TCAACTGTCT CGTTTAGCTA CGGTGTACAC ATGCTTCTAC ATACGTTCCG CGGGTGTCTA TTGTTGCCCT TGTCCTTACA GTGCGTCTAG AGTAAACTAA CCAAGATACG ATTGCGTATA CCGGGACAAT AGGATAACAT TTGCACGGAG ACACGTGGTC AACTATACGA GGCACGTAAC CGCAGGGCAC TACCAAAGTC CGGTTATTTA AGTTTATATT TTTGCCTAGC CGTCGAAAAA ACATGCATAT ATTAAAATTA ATAAAACCGT TTATTCTCTA TATCGTACAT TGGTTATGAG CGCTTTAGCA CCAAAATATA ACGAGTTCTA TAAACGCAGT TAAATTCAAT TGATTTTACC TTACCAGCAG GCAGTTTCTC TCCACAAACA TTTAAGCCTC ATTCCTAACG TGCGGGAATT CTCCTCATCC GATAGAAACA TATTAGTGTA CGGACACTTC TCCATTCTTT GACAATGTGG TGACAGGGGA ATATCATTTA CGACAGTGCG AAGCGTCTCC TTTACCGAAT AAACCTCATG ATTCTAACAT TAAAGTCGTT GCAATAGGTA CGGATATTCT AAAATTGAAA CTATGCACAA TCACGGGTAT ACCATATATA TATAGTAGGG TGGGAAAAAT AGGACACCAT TTTATTCTAT TTTCTCGTCC CATTTTGTAG AAAACAAGGA ACATTTAAAG AATTATAAAA CCGTATCCGT ACGACTACCA TAGACCGTTG TAAATTGTTT AAACACGATC AAGATATTTG GATATTATGT GCTAACGGTG TCTCATCTAC CCCCACCCTA TTATAACACC AAACGTTAAA AATTCATTGC ACCGAATGTT CCACCGTTTT AGTGTATTAG CGGATTCAGA ATGTCGCACG CGTTCAAAGC GACCCAGTAC CTATTGGTGT CAATTAACAC CATTTTGGAT CGAGTTTTCG GATGAGCATT TGTGTGAAAA TTAGCGGTTC ACTCTGCCGG CCATCCTCAG GTTGAGATAA CGCATCCATC GCAAAGTAGC AGCTGAAGTG AAGACTTGCG ATCGGAGAGA ATTTAATTTC GATATTTTTA TTTGCATTGA TTTACAAAAA CATTTATCCA GTTTTTGATT TTGAAAACAA TAGAGTAGGG TGGGGGGAAA TGGGATACCC TTTCATTCTA TTTTCTTGTT CCATTTAGTA GTAAACAAAG ACTTTTCAGA GAATTATAAA ACCGTATTCT CACGACTCCC ACAGCCCTTT GTTAATTGTT TAAAACATGA TTAGGATATT TGAATATAAT GTCCCAAAGA TGCCCCATCT TCCGCCACAG TACTATACTT GAAAAATATA TTGTTCTGCC CCTAAAATAG GAACTTTAGG GGGAGATTTT TCTTACGCAC ATGATAAATT AATATGTTGT TACCGATAAA TTGTAGATAC TTAAAATGAA AAGGTCGCAA TTGTATTTAC CATTATAAAA CAGAAGATCG ATGTGTTTTG CTGGACAAAT ATTGAGAAAA TCTGTGGCGA CAACTGTGGT CTGATTTACA GGCGAGTTGG ACGGAGTTGA CAGGTCGCGA AAGCGATCCC ACCTTCGTGT CTGGGTTTCG AGGTGCCGCC CGTCGTGCAG TAGCAACTGT GCGGTCAAGT TGAGAGCAAG AAGACACTAC AGCGCGCTTT GAAGCGTCCA AGCCGCCCGC TGAGCAGGGC GGATAGCTCG TTTGGCACCT CGTCTGGCAT CGTCCGCACT GTCAACCTTC TTCGTACAAA CGTCCTCACC TGCCGCGCAG GATTGCTTCA TATGGCAGAC CGAGTTGAGT GGGAAATCAT ATTCTGGTTG CTTCGCTTAT AGCTAGCTCA CTAGAGACTA GAGTGTTGTG AATGATGAAT CATTTGAATT AAGCATTTTG TTTAGTTGAT CAAATGAGTT TTAGTTTGAT GTTCAGGACT GCTAAGTAAT GCAGTGAAAG GAATTCTAAA GTGATTATAT TTAGAAATGG GCTATCAGTG CTTGATTACT GTTGCAGGGT TATTTAAAAA TGCAGCCGAA CAGTCTAAGG AAGCTTAGCT ATATTTGAAG GATTATGTAT ACTTATTTCA TTATAGCAAT ATTTATTTTA TTATTTTAGA CTTTTGGTAC ATATTCAAAA TATTAAAATT CTCACTGTGA AATATATTAC TGTGATTACA TCATGACCTC CGTCGAGCCC ATGCTTTATC AAGGCAAGCA CGCCGTTCAG AAAAATGAAG GTATATATGC AGACTTATTT ATATTATAAT TCATCGCGGC AATTGTTTCT CTTATAAAAA TCAAACGCGA TCATTTTAA