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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-Pax6

Organism: C. intestinalis
Dataset: JGI 1
Description: -3000:+200 region of ci0100144072
Promoter location: scaffold_337:76626-79825:-
Gene alias: ci0100144072

Reported binding sites
Name Motif Factor Position Strand Reference Sequence
UA unknown unknown 78583 + 47 CTTTTTCTCC GGGAACACTG ATCTACACCG AGCAACAACA ATGGCCACCG AACCTTGTTC CCACGATGGC CGAGAAAAGG AAAAAAGCGG GGGGATTCCC CGATTACGTA TATAGTAGCA TCGACGAAAC ATTTCTTGGA TTTTGGGAGC CGTCGTCATC CAAATTACTC CAGCAAAATA TTCAGGAAAA TTTAAGTCTA TACTGAAGAG
UB unknown unknown 79125 + 47 GCATGTTTTG TTTATTTTTC GGCGGCAACT ACGTTAGGTT ACTGTCATTT TACGAGCGAG GCTGAACGAC AAAGGCTGCC GCAGCGATAT TGTTTTTTAA TACTAATTCT CCGCTTTGTT TCGGGGTCTT AATCAATACA TTACGGGCTC CCTATTCAGG TATTGTTAAC CGATTCTTTA GAGCAGTGAT GCCATGTAAA AATATTTAAA ATCCTGATTT TGTTTATACG
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  • reported binding sites
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Sequence
CTGTAATAAT AATAATGGTA TCTTCTCGTT TAAATGCACT AAAATAATGC ATAAAGTTTT GAATATTTTT TATGACAATC AAGAGAATAT TAAACAATAA ATGCGTGAAT TATGAAATTT AGACACGTGG AAAAACTATG CCAAAGAACA AGAACAAGTA TTCGGCGAAA AAGGAAATGA CGACGTACTT GCTGAACTGG ATGTAAGATA ACGTTGGATG TTGTCGGTAG GTGGTGTGAG AGAGCGATAT GGCAAGCTTC ATTTATATTT CTCAATATTT TTCCACACAC GTGACGCGTC CGTCAGGTAT TTTAAATTTA GATCTTTATT GCCTAAATTT AAATATCAAT TGAACTCAAT ACAACGAATA TTTCTTAGTT TTATTTATTT TAAACAAACT ATAAAGCTAA AGTGAGTTTT ACTGAAAAAT AAAATTAAAA TTAAACAAAA TTTGTTACAC GCTCTTATCA GCATGTTTTG TTTATTTTTC GGCGGCAACT ACGTTAGGTT ACTGTCATTT TACGAGCGAG GCTGAACGAC AAAGGCTGCC GCAGCGATAT TGTTTTTTAA TACTAATTCT CCGCTTTGTT TCGGGGTCTT AATCAATACA TTACGGGCTC CCTATTCAGG TATTGTTAAC CGATTCTTTA GAGCAGTGAT GCCATGTAAA AATATTTAAA ATCCTGATTT TGTTTATACG CCCTCTCTAT ATACAGATTT GTGTATATAA GCGCATCGTA TGTAATATAT ATATACGCCT CTTTATATGT AAATTACGCG TGTCTCTGGA AAGAATTTAA ACCTTGAAAT TATACTGCAA CGTAACCGAA TATTAAACAT AGTTTTTTTT CGAGTTGTAC CGTATTTTCT ACTTTGGTAT GCCATATACA CCATCAAGGA ATATGCGTTT AAGTGTCTTG CTTTCTCAAT GCAAGTAAAT CTAGTGATCT AAATATACCA CAGTTCCTCT CTTGGGACTT AATGCTTGTT GCTCTATCAA ACTGGGCCGT TACTTTTCTC TACGGTCCGT CACTTTTTCT CCGGGAACAC TGATCTACAC CGAGCAACAA CAATGGCCAC CGAACCTTGT TCCCACGATG GCCGAGAAAA GGAAAAAAGC GGGGGGATTC CCCGATTACG TATATAGTAG CATCGACGAA ACATTTCTTG GATTTTGGGA GCCGTCGTCA TCCAAATTAC TCCAGCAAAA TATTCAGGAA AATTTAAGTC TATACTGAAG AGTTTTTGAG CGATTTTTGT CAAAGGACTG AAAATAGAAG CAAAAAGTTG CAGAAAGGAA AAGTAAAGTA GACAGAAAAT TGATTCGTGA GGAAAAATGT TTTCGTGACT GAAAATAGAA ATTATGACAT AAATAACAAC GTTTTTTTTA TTTTGTTTAA AACTTAAATT TATAAACATA TTAATATGGG CGGTTATTTT ATATAAGAAA CAATTAACCT GTATTTCACA TCTATACTTT ATATTTGATA AGTATAAATA TTTTTCCCGT GCATAATATT GACTCGATGG AAATTCATCA AAATGGCGAC TAGCGCGCAC AGCGAACGCA TTGCAGTTTC GGCATTATAT AATCGCTGTT ATAAAGCGAA ACTTTTTTCA AAACCATAAT AACTTACAAC TATACCCCCA AAAAATCGTA ATTCGTTTTT AATTTTTTTA AATATTGCTA GCTTTAAAAA TGGTGCGAAT GTTTTTATAA ATCAAAAGTA GTTTTTTTTC TAACGGTTCC TATAACACTA CTGCGTTACG ATTCCGAAAC CTGCTTCGGA TTAGCTTATT AATTTCGGTG GGACTTTGGG CGTCCACGGG CCGATATCCC GTTGCGTTAA TCCGCACCGA TTTGGTGCAA TTCGGAAAGC CCTTCCATGT CGGCCATTGT ACGGAACACC ACTCCTCCGA GCCCGAGGTC TCGCGCCACG TTTCGATTCA AATTTTATTT AAAAGTTTCG CCGAAGTAGT TTACAGATGT ACGAAAGTAG TTGCCTGTTG CACCTGCTCG TGTAGACTCA ATTTCACGAC GGTTTAAACC ACGGACAACA AGACTCCAAT TTTAGGCTTG TTTTCAAGAT TCGATCCGTA CTGATAAAAC TGTTTGCTCA CAAATGTAGT AACATACCCA TTTCCAAGGC CGCTTTTCCG CTATCGCTTA ACGATAACAG CAGAGTCGCG TGCCCACACC ACGCAAATAT AAGTATCAGC AAAGTGACAA CACCGAAATA GCTCACCGGC GGCTCCAGAA CAAATATTAA CTCATTCTGT TTATCGCAGT TCCGGCCAAA TAAAACAACT GTTCCACGAT TAACACTCTG CGGCTACAGG CCCAATATAT CCCCGCCTTA CCGTGTTCGT CAGCGCCAAA TTTCATTCTT ATCGCTCCGT CATATGTTAT GTTGTCCCGA CTTCGATTTT CGTGTTTTGA ATTTGCTTTC GGAAACCGCG ATATCTTCGA AATTTTATTT TGTCGTCGCT TGTTTTTGTT ATGTACCGAA AACCGAGATG GTTAATGTTT GAAATATAAA CCTTGGTCGA ATTAAACAGG ATAATATGTT AAAACAAGCA GACGATAAAT AAAATGATAT AGTAGGGTGG GGGGAGATAG GACACCTTTT CAATCTGTTT TCTCGTCCAA TTTGGTAGTA AACAAAGAAC ATTCAAAGAA ATATGAAACC GTATTTTACG ACTCCCATGC ACCGTTGTTA ATTGTTTAAA AACACAACTA GAAAGTTTAG ATATTATGTG GTAAAGGTGT ACCGTCTTCC CCCGTTCTAC TTTAAAAAAA TATACAAAAA AACATATTAA TTACCACCAA GACATATTCT TTGTAATTTT TGCATGCCTT TATGAATTGT TTACCTTATA ATTTTAAACC TTACTGACAT TATTTTAATG ACAGACATAT ACTGTTATAT ATAAAGGACT TTTCTGATTT AGGAAAATTT ACATTTTCTG TCTCTGGACA TTTTCGGCGA AATATTTTAA ATGGCGACGT ACGATTCTTG TAGGCAAGCC AGCAGCATGG CGTTGTGTTT TAATAGGGAA AGTCTTCCAC ATAAAGGTAC GTTTATATTA TACAACTATA GTAGAGTGGG GTAGGATGGG ACATGTTTTC ATTCACTTTT TACGTCCCAT TTGGTTGTAA ACAAAGAATA TTTTCAGTTA TTTAACCGTA GCCATAACT