Copyright © 2005-2008, Human Genome Center,
Inst. Med. Sci., Univ. Tokyo. All rights reserved.
Version 2.0
D B T G R
DataBase of Tunicate Gene Regulation
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eg: snail, muscle, ci0100133445, ...
names
tissues
transcription factors
gene ids
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eg: chr09q:3065382-3068581, ...
C. intestinalis
1.0
C. intestinalis
2.0
C. savignyi
1.0
C. savignyi
2.0
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About DBTGR
Ci-BCO/RPE65
Gene product: beta-carotene 15,15'-monooxygenase (BCO)/RPE65
Organism:
C. intestinalis
Activity reported
An unknown factor regulates Ci-BCO/RPE65 in
photoreceptor
in
C. intestinalis
(
1
)
Reporter construct expression
Name
Gene
Size
Tissue
Construct
Ci-BCO
Ci-BCO/RPE65
1997
brain vesicle (photoreceptor cells)
Sequences available
ID
Gene
Description
Organism
Dataset
Dataset ID
s00003
Ci-BCO/RPE65
Mapping of the Ci-BCO expression vector insert
C. intestinalis
JGI 1
blat
s00084
Ci-BCO/RPE65
Mapping of the Ci-BCO expression vector insert
C. intestinalis
JGI 2
blat
s00190
Ci-BCO/RPE65
-3000:+200 region of ci0100141268
C. intestinalis
JGI 1
ci0100141268
s00191
Ci-BCO/RPE65
-3000:+200 region of ci0200292212
C. intestinalis
JGI 2
ci0200292212
s00192
Ci-BCO/RPE65
-3000:+200 region of ENSCING00000009589
C. intestinalis
JGI 2
ENSCING00000009589
References
Kusakabe T., Yoshida, R., Ikeda, Y., Tsuda, M. (2004). "Computational discovery of DNA motifs associated with cell type-specific gene expression in Ciona."
Dev Biol
276
:563-580. (
PUBMED
)