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D B T G R

DataBase of Tunicate Gene Regulation
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About DBTGR

Ci-OrphanWnt-e

Gene product: Wnt family
Organism: C. intestinalis
Summary of experimentsCi-macho1 binds to 5'-GCCCCCCGCTG-3', the terminal Gs and the central CCC being critical for binding in vitro (Yagi 2004)

The following Ci-macho1 binding sequence were identified:
at -63 (GCGCCCCTGTG)
at -995 (GCCGGCCGCGG)
at -1311 (TCGCCCCGGTG)
at -2745 (GCCCTCCGCAT)
at -2953 (GCCCACAGCTA)

Positions are relative to the 1st nucleotide of the longest EST.
Activity reported

Ci-macho1 regulates Ci-OrphanWnt-e in muscle in C. intestinalis (15)
Sequences available
ID Gene Description Organism Dataset Dataset ID
s00332 Ci-OrphanWnt-e -3000:+200 region of ci0100149085 C. intestinalis JGI 1 ci0100149085
s00333 Ci-OrphanWnt-e -3000:+200 region of ci0200384531 C. intestinalis JGI 2 ci0200384531
References
  1. Yagi, K., Satoh, N., Satou, Y. (2004). "Identification of downstream genes of the ascidian muscle determinant gene Ci-macho1." Dev Biol 274:478-489. (PUBMED)