Copyright © 2005-2008, Human Genome Center,
Inst. Med. Sci., Univ. Tokyo. All rights reserved.
Version 2.0
D B T G R
DataBase of Tunicate Gene Regulation
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eg: snail, muscle, ci0100133445, ...
names
tissues
transcription factors
gene ids
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Genome region
eg: chr09q:3065382-3068581, ...
C. intestinalis
1.0
C. intestinalis
2.0
C. savignyi
1.0
C. savignyi
2.0
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About DBTGR
Ci-Prx
Gene product: unknown
Organism:
C. intestinalis
Summary of experiments
3kb upstream of the ATG is enough to drive expession in the sensory vesicle around the ocellus.
When knocked-down by morpholinos, only one pigmented cell, the spherical otholith, is present. The cup-shaped ocellus is absent.
Activity reported
An unknown factor regulates Ci-Prx in
brain vesicle
,
sensory vesicle around the ocellus
in
C. intestinalis
(
39
)
Reporter construct expression
Name
Gene
Size
Tissue
Construct
Ci-Prx
Ci-Prx
7212
brain vesicle
Sequences available
ID
Gene
Description
Organism
Dataset
Dataset ID
s00071
Ci-Prx
Mapping of the Ci-Prx expression vector insert
C. intestinalis
JGI 1
blat
s00147
Ci-Prx
Mapping of the Ci-Prx expression vector insert
C. intestinalis
JGI 2
blat
References
D'Aniello, S., D'Aniello, E., Locascio, .A, Memoli, A., Corrado, M., Russo, M.T., Aniello, F., Fucci, L., Brown, E.R., Branno, M. (2006). "The ascidian homolog of the vertebrate homeobox gene Rx is essential for ocellus development and function."
Differentiation
74
:222-234. (
PUBMED
)