Copyright © 2005-2008, Human Genome Center,
Inst. Med. Sci., Univ. Tokyo. All rights reserved.
Version 2.0
D B T G R
DataBase of Tunicate Gene Regulation
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eg: snail, muscle, ci0100133445, ...
names
tissues
transcription factors
gene ids
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Genome region
eg: chr09q:3065382-3068581, ...
C. intestinalis
1.0
C. intestinalis
2.0
C. savignyi
1.0
C. savignyi
2.0
Show all gene expression reporters
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About DBTGR
Ci-vAChTP
Gene product: vesicular acetylcholine transporter
Organism:
C. intestinalis
Summary of experiments
Region from -3791 to -1 from the start codon allows expression in neurons of the brain vesicle, the visceral ganglion and the dorsocaudal epiderm.
Activity reported
An unknown factor regulates Ci-vAChTP in
brain vesicle neurons
,
visceral ganglion neurons
,
dorsocaudal epidermal neurons
,
cholinergic neurons
in
C. intestinalis
(
6
,
21
)
Reporter construct expression
Name
Gene
Size
Tissue
Construct
Ci-VACHT
Ci-vAChTP
4919
brain vesicle
,
visceral ganglion
Ci-VACHT
Ci-vAChTP
3792
brain vesicle
,
visceral gangnlion
,
dorso caudal neurons
Sequences available
ID
Gene
Description
Organism
Dataset
Dataset ID
s00055
Ci-vAChTP
Mapping of the Ci-VACHT expression vector insert
C. intestinalis
JGI 1
blat
s00063
Ci-vAChTP
Mapping of the Ci-VACHT expression vector insert
C. intestinalis
JGI 1
blat
s00132
Ci-vAChTP
Mapping of the Ci-VACHT expression vector insert
C. intestinalis
JGI 2
blat
s00140
Ci-vAChTP
Mapping of the Ci-VACHT expression vector insert
C. intestinalis
JGI 2
blat
s00402
Ci-vAChTP
-3000:+200 region of ci0100151967
C. intestinalis
JGI 1
ci0100151967
s00403
Ci-vAChTP
-3000:+200 region of ENSCING00000002569
C. intestinalis
JGI 2
ENSCING00000002569
References
Kusakabe T. (2005). "Decoding
cis
-regulatory systems in Ascidians."
Zoolog Sci
22
:129-146. (
PUBMED
)
Yoshida, R., Sakurai, D., Horie, T., Kawakami, I., Tsuda, M., Kusakabe, T. (2004). "Identification of neuron-specific promoters in
Ciona intestinalis
."
Genesis
39
:130-140. (
PUBMED
)